miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|292533680|gb|GW755393.1|GW755393 TTTTTTTTTTTTTTTTCTAGAAATGATTAGAAAAGATTCTGGATTAGGAGAAACATTTGAAAAGTTCCCTGCAGCAATCA
ATTCACATTAGTACATAATCACATTTCTGACAGGATATTGCTGACACTTCCACGGTAGGGGCTGTGGTGCAAAAATTACA
ATATCCCAACATATAAAGCATAACCAGAGCATGCATACTCCTAATTAGTAAACATGTTCCAGGGGTGAGAAAGCATTTTA
TGCAGTCCCCTTTTCATTATAACATGCACTACCAGAAATTTACAGCCCCCAAAATAGAACAATAGATTACAAGAATAATT
GGGGAATCAAGTCTATTACAATCCTACTGGTTGTGCCACACCCTGACCTTTGGCTACTGCAGCTGCGGCAAATCTAGTCT
ATTACGATCCTACTGGTTGTGCCACACCTTGACCTTTGGCTGCTGCAGCTGCAGAAGCTGCAGTTGATGAAGGTGATGCT
GGTGGTGGAGTAGGTGCAGCAGATTTTTGTGGTGTTGCTGACAAAGATTTAGACTGACTGTTAACTTGTGCAAGCAAAGC
TTTAATTTGATTCCCACTGAGTGTCTCATGCTCAAGAAGTGCCTTTGCTAGTGCATGTAGTTCTTTTTGGTGTGTGGTCA
AAATGGCTTTTGCATTTCCATAAGCTCTTTCCAGAAAATCTCTTACTTCGTTCTCAATAAGTTGCCGTGTCTCTGTGCTC
ATGCTCTTCCCATTGTCATCGTAGTTATGTGTTACAAGTCCTACAGCTTTGCTCATTCCATATTTTGTTACCATAGCTCT
GGCAATTGATGTTGCCTGCTGG




Most similar to sp|O80983|FTSH4_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O80983|FTSH4_ARATH ATP-dependent zinc metalloprotease FTSH 4,
           mitochondrial OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2
          Length = 717

 Score =  114 bits (285), Expect = 8e-25
 Identities = 60/95 (63%), Positives = 68/95 (71%)
 Frame = -2

Query: 821 QQATSIARAMVTKYGMSKAVGLVTHNYDDNGKSMSTETRQLIENEVRDFLERAYGNAKAI 642
           +QAT +ARAMVTK+GMSK VGLV HNYDDNGKSMSTETR LIE+EV+  LE+AY NAK I
Sbjct: 566 EQATKLARAMVTKFGMSKEVGLVAHNYDDNGKSMSTETRLLIESEVKQLLEKAYNNAKTI 625

Query: 641 LTTHQXXXXXXXXXXXXXETLSGNQIKALLAQVNS 537
           LT +              ETLSG QIK LL  +NS
Sbjct: 626 LTVYNKELHALANALLQHETLSGKQIKELLTDLNS 660